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dh5α  (New England Biolabs)


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    New England Biolabs dh5α
    Dh5α, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 3654 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/e+coli+neb+5+alpha/NEB+5-alpha+Competent+E%2E+coli/pmc12796543-239-6-7
    Average 99 stars, based on 3654 article reviews
    dh5α - by Bioz Stars, 2026-10
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    Related Articles

    Plasmid Preparation:

    Article Title: Automated Cell-free Protein Synthesis for Distributed Biomanufacturing
    Article Snippet: E. coli BL21 (DE3) (NEB, C2527I), E. coli BL21 Star (DE3) (Invitrogen, C601003), ClearColi BL21(DE3) (Biosearch Technologies, 60810-1), and E. coli SHuffle (NEB, C3028J) strains were used to prepare cell-free lysates. .. E. coli NEB 5-alpha (NEB, C2987I) was employed for plasmid cloning and purification. ..

    Article Title: Multimodal diffusion for joint design of protein sequence and structure.
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High-Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5-alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole-plasmid sequencing.

    Article Title: Convergent evolution of antibiotic resistance mechanisms between pyrrolobenzodiazepines and albicidin in multidrug resistant Klebsiella pneumoniae
    Article Snippet: Codon-optimised (DNASTAR Lasergene 16) synthetic K. oxytoca and K. pneumoniae albAS (Supplementary Table ) were cloned into pET28a(+) using Gibson assembly with the primer pairs listed (Supplementary Table ). .. The plasmids were initially transformed into E. coli NEB-5-alpha, and, once DNA isolated (NEB Monarch® Plasmid Miniprep Kit) and sequence confirmed (MRC PPU DNA Sequencing and Services), into E. coli BL21 (DE3). ..

    Article Title: Multimodal diffusion for joint design of protein sequence and structure
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High‐Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5‐alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole‐plasmid sequencing.

    Article Title: International Multi-site Implementation of Local Cell-Free Protein Biomanufacturing to Advance Health and Research Equity
    Article Snippet: .. E. coli NEB 5-alpha (NEB, C2987I) was used for plasmid cloning and purification. ..

    Article Title: Bioconjugate vaccines' synthesis in prokaryotic cell lysates
    Article Snippet: .. E. coli NEB 5-alpha (NEB) was used for plasmid cloning and purification. ..

    Cloning:

    Article Title: Automated Cell-free Protein Synthesis for Distributed Biomanufacturing
    Article Snippet: E. coli BL21 (DE3) (NEB, C2527I), E. coli BL21 Star (DE3) (Invitrogen, C601003), ClearColi BL21(DE3) (Biosearch Technologies, 60810-1), and E. coli SHuffle (NEB, C3028J) strains were used to prepare cell-free lysates. .. E. coli NEB 5-alpha (NEB, C2987I) was employed for plasmid cloning and purification. ..

    Article Title: International Multi-site Implementation of Local Cell-Free Protein Biomanufacturing to Advance Health and Research Equity
    Article Snippet: .. E. coli NEB 5-alpha (NEB, C2987I) was used for plasmid cloning and purification. ..

    Article Title: Bioconjugate vaccines' synthesis in prokaryotic cell lysates
    Article Snippet: .. E. coli NEB 5-alpha (NEB) was used for plasmid cloning and purification. ..

    Purification:

    Article Title: Automated Cell-free Protein Synthesis for Distributed Biomanufacturing
    Article Snippet: E. coli BL21 (DE3) (NEB, C2527I), E. coli BL21 Star (DE3) (Invitrogen, C601003), ClearColi BL21(DE3) (Biosearch Technologies, 60810-1), and E. coli SHuffle (NEB, C3028J) strains were used to prepare cell-free lysates. .. E. coli NEB 5-alpha (NEB, C2987I) was employed for plasmid cloning and purification. ..

    Article Title: International Multi-site Implementation of Local Cell-Free Protein Biomanufacturing to Advance Health and Research Equity
    Article Snippet: .. E. coli NEB 5-alpha (NEB, C2987I) was used for plasmid cloning and purification. ..

    Article Title: Bioconjugate vaccines' synthesis in prokaryotic cell lysates
    Article Snippet: .. E. coli NEB 5-alpha (NEB) was used for plasmid cloning and purification. ..

    Amplification:

    Article Title: Multimodal diffusion for joint design of protein sequence and structure.
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High-Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5-alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole-plasmid sequencing.

    Article Title: Multimodal diffusion for joint design of protein sequence and structure
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High‐Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5‐alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole‐plasmid sequencing.

    Clone Assay:

    Article Title: Multimodal diffusion for joint design of protein sequence and structure.
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High-Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5-alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole-plasmid sequencing.

    Article Title: Multimodal diffusion for joint design of protein sequence and structure
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High‐Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5‐alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole‐plasmid sequencing.

    Transformation Assay:

    Article Title: Multimodal diffusion for joint design of protein sequence and structure.
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High-Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5-alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole-plasmid sequencing.

    Article Title: Convergent evolution of antibiotic resistance mechanisms between pyrrolobenzodiazepines and albicidin in multidrug resistant Klebsiella pneumoniae
    Article Snippet: Codon-optimised (DNASTAR Lasergene 16) synthetic K. oxytoca and K. pneumoniae albAS (Supplementary Table ) were cloned into pET28a(+) using Gibson assembly with the primer pairs listed (Supplementary Table ). .. The plasmids were initially transformed into E. coli NEB-5-alpha, and, once DNA isolated (NEB Monarch® Plasmid Miniprep Kit) and sequence confirmed (MRC PPU DNA Sequencing and Services), into E. coli BL21 (DE3). ..

    Article Title: Multimodal diffusion for joint design of protein sequence and structure
    Article Snippet: The GFP sequences were codon optimized for E. coli expression using Integrated DNA Technologies (IDT) Codon Optimization tool, and gene fragments for GFP variants were obtained from IDT (eBlocks Gene Fragments). .. The plasmid backbone and gene fragments were amplified using Phusion High‐Fidelity DNA Polymerase (Thermo Scientific) with compatible overhang sequences, cloned using Gibson assembly, and transformed into E. coli NEB 5‐alpha. .. The correctness of the sequence of the constructed plasmids was verified using Plasmidsaurus whole‐plasmid sequencing.

    Article Title: Engineering auxin degradation into root-associated bacteria promotes plant growth
    Article Snippet: PCR products were purified using the DNA Clean & Concentrator Kit (Zymo Research) and assembled into pMo130 using HiFi Gibson Assembly Master Mix (New England Biolabs). .. Assembled plasmids were transformed into E. coli NEB 5-alpha (New England Biolabs), selected on Lysogeny Broth (LB, Thermo Fisher Scientific, BP1427) agar (2% w/v) supplemented with kanamycin (50 μg/mL), and verified by Sanger sequencing (Genewiz). ..

    Isolation:

    Article Title: Convergent evolution of antibiotic resistance mechanisms between pyrrolobenzodiazepines and albicidin in multidrug resistant Klebsiella pneumoniae
    Article Snippet: Codon-optimised (DNASTAR Lasergene 16) synthetic K. oxytoca and K. pneumoniae albAS (Supplementary Table ) were cloned into pET28a(+) using Gibson assembly with the primer pairs listed (Supplementary Table ). .. The plasmids were initially transformed into E. coli NEB-5-alpha, and, once DNA isolated (NEB Monarch® Plasmid Miniprep Kit) and sequence confirmed (MRC PPU DNA Sequencing and Services), into E. coli BL21 (DE3). ..

    Sequencing:

    Article Title: Convergent evolution of antibiotic resistance mechanisms between pyrrolobenzodiazepines and albicidin in multidrug resistant Klebsiella pneumoniae
    Article Snippet: Codon-optimised (DNASTAR Lasergene 16) synthetic K. oxytoca and K. pneumoniae albAS (Supplementary Table ) were cloned into pET28a(+) using Gibson assembly with the primer pairs listed (Supplementary Table ). .. The plasmids were initially transformed into E. coli NEB-5-alpha, and, once DNA isolated (NEB Monarch® Plasmid Miniprep Kit) and sequence confirmed (MRC PPU DNA Sequencing and Services), into E. coli BL21 (DE3). ..

    Article Title: Engineering auxin degradation into root-associated bacteria promotes plant growth
    Article Snippet: PCR products were purified using the DNA Clean & Concentrator Kit (Zymo Research) and assembled into pMo130 using HiFi Gibson Assembly Master Mix (New England Biolabs). .. Assembled plasmids were transformed into E. coli NEB 5-alpha (New England Biolabs), selected on Lysogeny Broth (LB, Thermo Fisher Scientific, BP1427) agar (2% w/v) supplemented with kanamycin (50 μg/mL), and verified by Sanger sequencing (Genewiz). ..

    DNA Sequencing:

    Article Title: Convergent evolution of antibiotic resistance mechanisms between pyrrolobenzodiazepines and albicidin in multidrug resistant Klebsiella pneumoniae
    Article Snippet: Codon-optimised (DNASTAR Lasergene 16) synthetic K. oxytoca and K. pneumoniae albAS (Supplementary Table ) were cloned into pET28a(+) using Gibson assembly with the primer pairs listed (Supplementary Table ). .. The plasmids were initially transformed into E. coli NEB-5-alpha, and, once DNA isolated (NEB Monarch® Plasmid Miniprep Kit) and sequence confirmed (MRC PPU DNA Sequencing and Services), into E. coli BL21 (DE3). ..

    other:

    Article Title: Protocol for conditional gene expression in Magnaporthe oryzae via fungal nitrate reductase promoter replacement
    Article Snippet: E. coli NEB 5-alpha , New England Biolabs , C2987I.



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    Image Search Results


    UBA7 variants from individuals with neurodevelopmental disorders alter protein structure (A) Pedigrees of the families studied in this article indicate the affected individuals 1, 2, and 3. A legend is provided for the symbols used. (B) Diagram of UBA7 protein domains and their functions. The location of the identified variants in the structure is indicated. IAD: inactive adenylation domain, AAD: active adenylation domain, FCCH: first catalytic cysteine half-domain, SCCH: second catalytic cysteine half-domain, UFD: ubiquitin-fold domain. (C) Alpha-fold models of UBA7 protein resulting from UBA7 wild type, or p.Trp311∗ and p.Lys709Serfs∗45 variants. The Red helix represents the added residues resulting from the p.Lys709Serfs∗45 frameshift variant. (D) Structure of wild-type UBA7 in complex with UBE2L6 and ISG15 (left; EMB-16891; pdb: 8OIF ). The top-view (middle) and zoomed areas (right) highlight the adenylation pocket and location of the p.Val548Leu mutation shown in red.

    Journal: iScience

    Article Title: ISGylation is disrupted by UBA7 gene variants identified in individuals with neurodevelopmental disorder phenotypes

    doi: 10.1016/j.isci.2026.115454

    Figure Lengend Snippet: UBA7 variants from individuals with neurodevelopmental disorders alter protein structure (A) Pedigrees of the families studied in this article indicate the affected individuals 1, 2, and 3. A legend is provided for the symbols used. (B) Diagram of UBA7 protein domains and their functions. The location of the identified variants in the structure is indicated. IAD: inactive adenylation domain, AAD: active adenylation domain, FCCH: first catalytic cysteine half-domain, SCCH: second catalytic cysteine half-domain, UFD: ubiquitin-fold domain. (C) Alpha-fold models of UBA7 protein resulting from UBA7 wild type, or p.Trp311∗ and p.Lys709Serfs∗45 variants. The Red helix represents the added residues resulting from the p.Lys709Serfs∗45 frameshift variant. (D) Structure of wild-type UBA7 in complex with UBE2L6 and ISG15 (left; EMB-16891; pdb: 8OIF ). The top-view (middle) and zoomed areas (right) highlight the adenylation pocket and location of the p.Val548Leu mutation shown in red.

    Article Snippet: NEB 5-alpha Competent E. coli (DH5α) , New England Biolabs , Cat# C2987.

    Techniques: Ubiquitin Proteomics, Variant Assay, Mutagenesis